rs230739477 SNP Detail

Summary

• ID
  rs230739477
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12327180 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTGTGTA TCTATGTGCA
  CTCCAGTCTA GTCCCAACAC ATGACCTAGG AGGCTACTGA CCATCAACAG GAATTACACC
  ACTTAATCCA CTAGAAGTTC CTCTTCTAAA TACATCAGTC CTTACTTTTG GCATCAGGAG
  TTATCAATCA CCCAAGCTCA TCACAGCCTA ATAGAAGGAA AATGAAACCA CAAACGAAGC
  Y
  CTATTCAATA CAATTGTTCT GTGTATCTGT GTGTGAGTGT GCTTGCATGT CTGTGTGTTT
  GTGTGTATAT GTATCTGTGT GTCCGTGTAT ACATGTGTAT ATGTTGGTAT GTTTGTGTAT
  ATGTGTCTGA GTATGTACAT GTCTCTAAGT CTGTGTATAT ATGTCTCTCT GTGTCTATTC
  CTGTATATGT GTGTGTGTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322497643	CHEV_8_12277180	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230739477					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12327180 () rs orientation: forward

Symbol	Name	Function Class
A230072I06Rik	RIKEN cDNA A230072I06 gene	1645 bp upstream
Rr659697	regulatory region 659697	1379 bp proximal