rs230746636 SNP Detail

Summary

• ID
  rs230746636
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84354725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTGTTGTT TTTCAACATA
  GCTAATAGCT AATATAGATC TTGAGGAGAG GAACAATTCT CCAATGGGGA TCTACTCCAG
  GCTTCCCAGG TGTAGGAGCT AAGATGTTGT TTCTTTTGCC TTGGAACTAA GGAGATCTTT
  ATTCAGTTCT ATTTGAGTAG CACTCTACGT GACTACCAAG GTTATATCCA CTTAAAGGAC
  A
  GCCGGCATAG CAAGCAGAAG TAGGAAACAA CTTTGGGAAG GAGATGCCCA GTGAGACGCA
  ATACCTCCCC TACATGCACG CAAGCACTTC TATACGCAAA CCCCGCTCTT CACGCTCATC
  AAATGGATGT AGGAAAGCAA GAAAGCCCAG GTTCATCATG ATGGTGGAGA AGACCTATCT
  TAAGACATAA ATCCTCTAAA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325260808	CHEV_16_84558082	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230746636					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84354725 () rs orientation: forward

Symbol	Name	Function Class
Gm32073	predicted gene, 32073	445 bp upstream
Rr404934	regulatory region 404934	1820 bp upstream
Rr518505	regulatory region 518505	416 bp proximal
Rr518506	regulatory region 518506	517 bp proximal
Rr518507	regulatory region 518507	1808 bp proximal
Rr518508	regulatory region 518508	1939 bp proximal
Tssr139145	transcription start site region 139145	669 bp downstream