rs230813311 SNP Detail

Summary

• ID
  rs230813311
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:113395421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTA CTTCCTCACT CACTAGAGAG
  R
  TCTAGTTAAG ATACAGACAC TATTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324175518	CHEV_12_114670012	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230813311					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:113395421 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighd4-1	immunoglobulin heavy diversity 4-1	1263 bp upstream
Ighg	Immunoglobulin heavy chain (gamma polypeptide)	within coordinates
Ighj1	immunoglobulin heavy joining 1	1968 bp upstream
Tssr115504	transcription start site region 115504	1561 bp downstream
Tssr118017	transcription start site region 118017	1959 bp upstream
Tssr118018	transcription start site region 118018	1416 bp upstream
Tssr118019	transcription start site region 118019	1360 bp upstream
Tssr118020	transcription start site region 118020	1315 bp upstream
Tssr118021	transcription start site region 118021	1198 bp upstream
Tssr118022	transcription start site region 118022	1169 bp upstream
Tssr118023	transcription start site region 118023	1006 bp upstream