rs230852009 SNP Detail

Summary

• ID
  rs230852009
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107649337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGGGCATC ACGTGGTGAG
  AACGTCCCTC TGGTCTCTCT CCTTATCATA AAGGTTCCAG GATTCAAGCA TGTAGGACCT
  CATCCTGGCT CCCTTCTGAT CTGTGTCATA AGCTCCCTTC GGATCAAGAT GTAGAACTCT
  CCAATTCTCC AGCACCATGT CTGCCTACAC TCTGCCATGC TTCCGCCATG ATGATAATGG
  M
  CTGAACCTCT GAAACAATAA GCCAGCCTCA ATTAAATGGT TTCCTCTATA AGAAGAGTTG
  CCTTAGTCAT AGTTGTCGCT TCACAGCAAT GGAAACCCTA ACTAAGACAT GTGGGAACGA
  GGAAGAGGGA TCCCACCCAG GAGGGAAGTC AGAAAGTGTC AGGTGACCTC AAAGCCTCAT
  GGGACCTGAG AGCTCATCTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321251323	CHEV_4_107464745	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230852009					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107649337 () rs orientation: forward

Symbol	Name	Function Class
Gm69341	predicted gene, 69341	within coordinates
Lrp8os3	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 3	1009 bp downstream