rs230912555 SNP Detail

Summary

• ID
  rs230912555
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:112684225 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCTGAGTT AGCACTTACC
  AGGTAAACCA GGCTGGCCTT GAACTCACGG AGCTCCACCT GCCTCTACCT CCTGAGTGCT
  GGGATTAAAG GTGTGTGCTA CCACACCCAG CAGCAGTTTA CATCTGTAAT CCCAGCACTG
  GGGAGATGGA GACAGGAGGA TTCCTGAGAC TTACTGGTCA GCAGGACGAC ATGGTGAGCT
  Y
  CAGGCCAATG AAAGGCAGAC GCCGTTCCTG ACAATGACAC CTGCGGTTCC CCGGGAAGGC
  GGGGGGTGGG GGGGGTGTCT CCACACACAT GCCTGCACAC ACAGCACACA TTAAGGAGAG
  AGATTTGGAA AGGTGCATCA TGGGAGTGTC TGTGAGGGCA CTTCCACTGA AGATTAACTA
  AACGGAGACA ACTTGCCCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324170460	CHEV_12_113956002	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230912555					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:112684225 () rs orientation: forward

Symbol	Name	Function Class
Gm46382	predicted gene, 46382	within coordinates
Gm59466	predicted gene, 59466	within coordinates
Rr473580	regulatory region 473580	943 bp distal
Rr473581	regulatory region 473581	363 bp distal
Rr473582	regulatory region 473582	452 bp distal
Tssr115398	transcription start site region 115398	1446 bp upstream