rs230936415 SNP Detail

Summary

• ID
  rs230936415
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:56265517 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGACCCCA AGGCCAGGGC
  TTCCATCTGC CCTGGTGGTG AAGGATAGAG GGTAAGAGGG TAGGAGGTTG TCTCTCTCCC
  TCATCCATGC CACCACATAG AAGATGAGCA GTAGGGCCAG CTCTCTCACA ATGCCCCGGT
  AAGGGGGTAG AGCCAGTTCC ACACAGTCTT CAGACATCAA TAGGTAGTAG ATCAGACCAG
  R
  GACATCTGCC TGTTCTTTGG TGGTAACAGA TATCTGCTGC TGCAGGACTA GGGATCCAGA
  TGTGGCCCCC AGTGGCAGCA TAGGCCAGGA GCCCACTATG GTCCCAGGTG GCACCACAGA
  ATACACATGA TGGAGCCAAG CAGGGGGCCA TCGTGCATAT GGCCTGATCC ACAATGCCTG
  CACAGTCTCA GGCTAGCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325856837	CHEV_19_56351575	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230936415					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:56265517 () rs orientation: forward

Symbol	Name	Function Class
Gm22271	predicted gene, 22271	433 bp downstream
Gm32257	predicted gene, 32257	within coordinates
Rr549993	regulatory region 549993	267 bp proximal
Rr549994	regulatory region 549994	497 bp proximal
Rr549995	regulatory region 549995	917 bp proximal
Rr549996	regulatory region 549996	943 bp proximal
Rr549997	regulatory region 549997	1007 bp proximal