rs231001128 SNP Detail

Summary

• ID
  rs231001128
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:55475235 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGGAAGGG AGGGAGGAAG
  GACCCCAGCA ACAGCACAAA TCAAATAGAA AATAACACAC TGGCAAGGAT GTGAAGGAAT
  TCCTAGCACA AGCACAGACT GGGGGAAGGG TGGGGGGGGG GGCGGCAATG TAAAATGATA
  CAGAGGCTAT AGAAATAGCA TGTGGTTTGG TTTTTGTTTT TTTTTTAAAT ATTTATTTAT
  Y
  TATCTATTTA GAAAACTCAA ACACAGAATT GTACACGACC CAACAATTCT ACTTCTGGTG
  AGATTGCCAA AAGTTTTAAA AGCAGTAATT GTGCAAATGT ACTCAGAGAG ATAGAGCTGA
  GGTAGTGCAC GTGTCTACAG GGTGATGAAT GGATCAGGAA AATGTGGCCT GGATCCCTAA
  TAGAATTTTA AAAAGAATGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321127976	CHEV_4_55488107	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231001128					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:55475235 () rs orientation: forward

Symbol	Name	Function Class
Gm12510	predicted gene 12510	within coordinates
Rr376520	regulatory region 376520	within coordinates
Rr592486	regulatory region 592486	704 bp distal
Tssr41779	transcription start site region 41779	144 bp downstream