rs231033942 SNP Detail

Summary

• ID
  rs231033942
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:87008734 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCTCGCTA TCAAGCTTTA
  TGTGCACGCT TTAAGGCAGT TTCTGTTGAG CAAAAGGAGA CCAAGAGCTG CATTTGTGCT
  ACTTTGAACA AGACAATGAC CATGATACAA GAACTACAAA AGCAAACAAA CCTGGAGGTA
  ATGTTTCCAG TTTATAGGTT GGAATTGTGA AGTTATTCCC CACCCCCACT GCCACCCCCA
  R
  TACAGGTTTC TCTGTGTAGC CCTGGCTGTC CTGGAACTTA CTCTGTAGAC CAGGCTGGCC
  TCGAACGCAT AAATCCACTT GCCTCTGCCT CCTGAGTTTG TGCTGCTACT GCTTGTTGGA
  TTTGTGAAGT TTAAGTTGTG AATATTGTTT AAAAAAAATA AAACCCCAAT ATGTTGTGCC
  ACATCCGTGC ACTGCTCCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323772705	CHEV_11_86931410	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231033942					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:87008734 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ska2	spindle and kinetochore associated complex subunit 2			Intron
				Noncoding-Transcript-Variant