rs231055632 SNP Detail

Summary

• ID
  rs231055632
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124155127 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCGGTTATT GCCCACACCG
  TTTCTCGGTC TCCATTAGTC ACTTCCCAGG AGAGGTTAAA AACCTGGTGG GGGCTGTTTC
  CCAACGCAAC GGGGTTGACC CCTCCGAGAA TCAGAAGGAC AATTAGGGGG CCCCACGGGT
  TAACCTGATT TTTAAAGGGT TTTGAGAGCG TTGTACTCTC CATGATGGTT TTATCGGGGG
  Y
  GTGGTCGCTG CCTTGACGTG GGCGGCGTGT ATCCATGCAG AGATGCCGTC TACCTTGAGA
  GCGGTGGGGG TGGTCAGTAG GACGGTGTAG GGTCCCTTCC AGCGAGGTTC TAAGTTTTTG
  GTCTGGTGCC GGCGCACCCA CACGGAGTCT CCAATCCGGA AGGGGTGCGG TATCACTGGT
  TGGTCTAGTC GGTCCCGGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322855355	CHEV_8_125952288	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231055632					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124155127 () rs orientation: forward

Symbol	Name	Function Class
Mela	melanoma antigen	within coordinates
Tssr2728	transcription start site region 2728	908 bp upstream
Tssr79965	transcription start site region 79965	22 bp upstream
Tssr83353	transcription start site region 83353	1649 bp upstream
Tssr83354	transcription start site region 83354	822 bp upstream
Tssr83355	transcription start site region 83355	729 bp upstream
Tssr83356	transcription start site region 83356	659 bp upstream
Tssr83357	transcription start site region 83357	540 bp upstream
Tssr83358	transcription start site region 83358	276 bp upstream
Tssr83359	transcription start site region 83359	577 bp downstream
Tssr83360	transcription start site region 83360	684 bp downstream
Tssr83361	transcription start site region 83361	1058 bp downstream
Tssr83362	transcription start site region 83362	1207 bp downstream