rs231108709 SNP Detail

Summary

• ID
  rs231108709
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:79628276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGA AAGACTAGAC TCTTCTCACC
  S
  GGGAGGTCTC CGGGTCGGTG CAGGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324677538	CHEV_14_79790643	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231108709					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:79628276 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6774	CpG island 6774	within coordinates
Naa16	N(alpha)-acetyltransferase 16, NatA auxiliary subunit	48 bp upstream
Rr404230	regulatory region 404230	within coordinates
Rr496090	regulatory region 496090	69 bp distal
Rr496091	regulatory region 496091	112 bp distal
Rr496092	regulatory region 496092	within coordinates
Rr496093	regulatory region 496093	24 bp distal
Tssr129900	transcription start site region 129900	1415 bp upstream
Tssr129901	transcription start site region 129901	183 bp upstream
Tssr129902	transcription start site region 129902	93 bp upstream