rs231132233 SNP Detail

Summary

• ID
  rs231132233
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107342336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCCCTGGG CTACATGTTG
  CCTCCTGATC ATTAATTAAT GAAGCCAAGA GGTCCCTTCC CCAGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TGTGTGTGTG TGTGTTTACA CAGACATGAG ACTTCTGCTT TTCTTATCTT
  GCTAAAGGTA TCAATTTCGA TTAAGGAAGT GAAAAGCATT AAAAGCGCCG GGGGGGTGGG
  C
  GGGGGGGGGG TACCTCCTAA GTTTTATTCC GTTTTGATGC TGTCCAGGCT TGGACCCATA
  GAGCAGTACA GTTGGGCCTG AATCTCAGCT TCACCTCTTT CAGGACTGTG ACTTTGAAAG
  TATGAACTTA CATGTCACGC TGCATTTTTT TCTCTGTGGA GCAAACTGTT ACACCAGTCT
  CAGAATGCCC TTCCATGAGC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	C57BR/cdJ	CZECHII/EiJ	DBA/2J	JF1/MsJ	NZO/HlLtJ	PL/J	PWK/PhJ	RF/J
ss359145525	MGP_WTSI_3_107237938	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	C57BR/cdJ	CZECHII/EiJ	DBA/2J	JF1/MsJ	NZO/HlLtJ	PL/J	PWK/PhJ	RF/J
rs231132233					SNP	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss359145525	MGP_WTSI_3_107237938	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107342336 () rs orientation: forward

Symbol	Name	Function Class
Rr582971	regulatory region 582971	926 bp distal
Rr582972	regulatory region 582972	895 bp distal
Rr582973	regulatory region 582973	1445 bp proximal