rs231140800 SNP Detail

Summary

• ID
  rs231140800
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:139436789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAAAACTT TAGAAATTTT
  ATAATTATAT TTTGGACTTG CTTTAGGGAT TAACTTCATT TCATATGCAT CAGTGTGTGT
  GAGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GAGTGTGTGT GTGAGTGTGT
  GTGTGTGTGT GTGTGGTGTC TATGTGAAAA TAATATACAC AATCTACATA TGAAAATGGG
  Y
  ATACCAAATA TGAAGATACA CATAACACAC ATTTAAAGAC AGACATGATG ATCATGAGAA
  ATGTACATAT TTCATATATT AAAATATATA GCATATATAA ATATGTGCAT GACAGTCATG
  TGAAAATACT TGTGGCACAT ATGAAATATG TGTGTAATAC ATGGAAAAGC ATACATAACA
  TATAGAAAGA TATGGATGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322019559	CHEV_6_139408312	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231140800					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:139436789 () rs orientation: forward

Symbol	Name	Function Class
Rr640348	regulatory region 640348	1492 bp proximal