rs231166006 SNP Detail

Summary

• ID
  rs231166006
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84353636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCCACCA AAGTCCCTGC
  CAAACACCAT TTTTTTTCTG TCTCTACAAA CGTGTTTACT CTAGAGGCCT TTCAGAAGCA
  GCATCAGACA ATACTGGATA TTCTGCATCC TCTCTCCCTC CCTTCCTCCC TCCCTCCCTC
  CCTCCCTCCC TCTCTAAATT GCTCTCTTAA GTGTTCTCTT TTTAATTTCT GATCTCCTGA
  C
  AGTTGGGCAT ATCCTATCTC TGACTCATTC AGTCAAACCC TTCTCTGATT CATCACTTTG
  TCTGCCCCTC AATTAGACCT GACTTTCAAA CATGACTGCT TCCTTCTAAA AACTGTGTGT
  CCTAAGGGCC TAGCTATATG CCAGCTAGAG AAATTAAAAG TCTATGGCAT GCCTGCACTC
  CAGATGGATC AATCACACAG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325260791	CHEV_16_84556993	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231166006					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84353636 () rs orientation: forward

Symbol	Name	Function Class
Gm32073	predicted gene, 32073	1534 bp upstream
Rr518505	regulatory region 518505	1505 bp proximal
Rr518506	regulatory region 518506	1606 bp proximal
Tssr139145	transcription start site region 139145	401 bp upstream