rs231180637 SNP Detail

Summary

• ID
  rs231180637
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:66827831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGA GGGGAGAGAG GGAGAAGAGA
  R
  GAGAAGAGAA GAGAAGATAA GATAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322989029	CHEV_9_66768356	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231180637					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:66827831 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21974	CpG island 21974	606 bp distal
Rab8b	RAB8B, member RAS oncogene family	862 bp upstream
Rr368814	regulatory region 368814	963 bp downstream
Rr401489	regulatory region 401489	575 bp downstream
Rr681814	regulatory region 681814	372 bp distal
Rr681815	regulatory region 681815	1720 bp proximal
Tssr85773	transcription start site region 85773	1687 bp downstream
Tssr85774	transcription start site region 85774	1667 bp downstream
Tssr90295	transcription start site region 90295	1352 bp upstream
Tssr90296	transcription start site region 90296	839 bp upstream