rs231185160 SNP Detail

Summary

• ID
  rs231185160
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128771966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGGCGGAG CCAGCCTTTC TGGACATGTA
  GTTTTCCCAG AGGGCCACTC AGACTGCACT AGGTCAGGGA GGGGCTGGTC TGGGGCTGAA
  GCTCTGGTAG GATACAGTAG TCACTCACTG AGCTCAGCAG CCAACGTCAC CCACACCCCA
  Y
  CCCTACCCCT TGCAGTCACT GAAGCTTTGG TTACTATTCT GTCCGAAGGC CTGGGGTTGT
  TAGACGCCCG GAGTGAAGCC ATGAAGCAGA GTGTGGCTGG GGCAGAGATG ACGGGGTGTT
  CTTATTCCAA GAGGACCTGG CTGGGTTCTT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323536828	CHEV_10_128373153	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231185160					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128771966 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2425	CpG island 2425	1833 bp distal
Gm67752	predicted gene, 67752	within coordinates
Itga7	integrin alpha 7	within coordinates
Rr441375	regulatory region 441375	within coordinates
Rr441376	regulatory region 441376	488 bp distal