rs231203856 SNP Detail

Summary

• ID
  rs231203856
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117430346 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGTCAAGT TCTCCTCCCG AGTGCCCCGT
  CAGCAAGCAG GCTCAAGAGA GGTCCTGACC AGATGGAGGA TGCCTTGGAG CCCGTAAAGA
  AACGGACACG AGGCATGGGT GCAGTGACCA AAGTTGACAT ATCCCGTCCC AGAGGACCAC
  K
  CTTCAGCACA GTGTCACAGA CCCAGGGCCA CACTGCAGCT CAGAAAGGCC CTAAGAAGGC
  AGGACCTCGT GGGTGCTCTA CTGTTGGTAC AGTGCTGAGG AACCAGAAGC CAGCTCCCAC
  TGTTCCTGCC CAGAAGCCTG GCACATCCAC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323497996	CHEV_10_117031497	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231203856					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117430346 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2233	CpG island 2233	123 bp distal
Gm63651	predicted gene, 63651	285 bp upstream
Kifc5c-ps	kinesin family member C5C, pseudogene	within coordinates
Rr402265	regulatory region 402265	1380 bp upstream
Rr439564	regulatory region 439564	1243 bp proximal