rs231208742 SNP Detail

Summary

• ID
  rs231208742
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:130729514 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTGTTCCT AAAGCACCAC TGGGCTTCAG
  AAAGTTCTGG ATGGCCTAGT GATGTTGGCC TTTATGTGAG CCATATAAGG ACTTGACACT
  TTGGAAACAG TAGCCTGTGG TGTCAGAATG CTAGCCATGC AGGGAACCTG GATTTGGTGA
  T
  TAGTAATCAA ACTGGGAACT AAGTGCAGCC ACACCCTGGG AGAGCCTAGA GAGGACCAGC
  TAAGGCAGGG AAGAGCAGGA CTTCCCTTGA CAGTAGTCCC CAAGGGAGGG GACATGGTAA
  ATTGTGGTAG GAAGAGAGCT GGAAGATGTA                                 
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319973484	CHEV_1_132698354	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231208742					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:130729514 () rs orientation: forward

Symbol	Name	Function Class
Fcamr	Fc receptor, IgA, IgM, high affinity	within coordinates
Rr30371	regulatory region 30371	within coordinates
Rr30372	regulatory region 30372	1088 bp proximal
Tssr8570	transcription start site region 8570	1137 bp downstream
Tssr8571	transcription start site region 8571	1305 bp upstream