rs231228911 SNP Detail

Summary

• ID
  rs231228911
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:40275888 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGACGGAA AGGAAAGCAG
  TGCGCGATTT TAATTTAGAA TCCTTTTCCT GACGATGGCT ATGAGTGTCT AGTGACTGGT
  GCCAAAAACA GTTATTCACT GCATTTAGAG CTACTGATCA GCCCCAAAGT GGTTCTAACT
  TATGCCTAGG AATATACTCA GGAGAATTAG TCAGAAGACA GTAGCAAGTA AGAAAAGCCA
  R
  CTCTCTGGCT GCACACTCCG CTCTCAGCAC TTAACAAAGC TTATGCTTAA CCCATCCTAA
  GTGTACACTC ATCCAAAGGG ATATTACTAG TACTGCTACA GACGTCCTGG GTTAGACAAT
  GGCTCCTCAC TGGCTAGGCG GGGCTGTGCT TGGCTCCCAC TACTGATGAG CTTCGCCAGA
  ATATTATTTT GCTTATTTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322915578	CHEV_9_40172177	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231228911					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:40275888 () rs orientation: forward

Symbol	Name	Function Class
Gm48114	predicted gene, 48114	within coordinates
Gm68184	predicted gene, 68184	within coordinates
Gramd1b	GRAM domain containing 1B	within coordinates
Rr194718	regulatory region 194718	913 bp proximal
Rr200102	regulatory region 200102	within coordinates
Rr200103	regulatory region 200103	313 bp proximal