rs231284771 SNP Detail

Summary

• ID
  rs231284771
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119229821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TACCATAga gatggctcac aagtactggg
  acctgatgcc aatccttagg atttgagttt gattcccagc tcctacagag tggaaagaca
  gaaccaactg caagttgtca tccaacctcA ATGTGTTCAT GCTCTCTCTC TTCTGTCTCT
  S
  TCTGTCTGCT TCTCTCCTTA acacacacac acacacacac acacacacac acacacacat
  gcatgcacac atacacatac aaacacacaT ATAAATAAGT AAAATATAAT AAAAATCTTA
  AAAGAAATAG AAGATACACT TAGCAACGTG                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323219419	CHEV_9_119309873	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231284771					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119229821 () rs orientation: forward

Symbol	Name	Function Class
Acvr2b	activin receptor IIB	1363 bp upstream
Cpgi22474	CpG island 22474	847 bp proximal
Gm53515	predicted gene, 53515	within coordinates
Gm69683	predicted gene, 69683	within coordinates
Rr688480	regulatory region 688480	462 bp proximal
Rr688481	regulatory region 688481	703 bp proximal
Rr688482	regulatory region 688482	1208 bp proximal
Rr688483	regulatory region 688483	1700 bp proximal
Rr688484	regulatory region 688484	1765 bp proximal
Rr688485	regulatory region 688485	1925 bp proximal
Tssr87682	transcription start site region 87682	1326 bp upstream
Tssr87683	transcription start site region 87683	1401 bp upstream
Tssr87684	transcription start site region 87684	1471 bp upstream