rs231301635 SNP Detail

Summary

• ID
  rs231301635
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:79492986 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCGTCCCAT GGTGGACACT
  TACAGCTAAG CCCTCCTCCC CACAGCACAG CACCGCCCTC GGCTCTCTGT CCTGGGTAGA
  CATGAACACA TTACTTAACC AGCTCTGTCA AACATGCCCT TTCCCTTCTC CTTCACCGGC
  CCCTGCCTCC CAGACAGCCA CCCTGGCTGA TGCTCATCCC GACGTTGATC CAGCTCACCC
  M
  CTTCTCCTCA CAGCCTCTAG CAGACCCTGC TGTAGTCTCA TGAATTCCCT GCTTCCAGCA
  GACCCCTTAA AACTACTCAT CACGCGTCGC CGGTACATTC CACTGTTTCA AATCTTCCTT
  TTGCTCAATA GAACTCAGGC CCCACCTTCC TAAGGGAGCC ACACATGGTA TGCAGAAATC
  AGCCCACCCA CTCCTCACCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss372032975	MGP_WTSI_7_86988124	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	A	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs231301635					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	A	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss372032975	MGP_WTSI_7_86988124	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79492986 () rs orientation: forward

Symbol	Name	Function Class
Anpep	alanyl aminopeptidase, membrane	within coordinates
Gm71751	predicted gene, 71751	within coordinates
Tssr67371	transcription start site region 67371	1399 bp downstream
Tssr67372	transcription start site region 67372	1148 bp downstream
Tssr67373	transcription start site region 67373	729 bp downstream
Tssr67374	transcription start site region 67374	689 bp downstream
Tssr67375	transcription start site region 67375	653 bp downstream
Tssr73165	transcription start site region 73165	1533 bp upstream
Tssr73166	transcription start site region 73166	1501 bp upstream
Tssr73167	transcription start site region 73167	1299 bp upstream
Tssr73168	transcription start site region 73168	1278 bp upstream
Tssr73169	transcription start site region 73169	1241 bp upstream
Tssr73170	transcription start site region 73170	1222 bp upstream
Tssr73171	transcription start site region 73171	1137 bp upstream
Tssr73172	transcription start site region 73172	1125 bp upstream
Tssr73173	transcription start site region 73173	1107 bp upstream
Tssr73174	transcription start site region 73174	1021 bp upstream
Tssr73175	transcription start site region 73175	993 bp upstream
Tssr73176	transcription start site region 73176	936 bp upstream
Tssr73177	transcription start site region 73177	910 bp upstream
Tssr73178	transcription start site region 73178	884 bp upstream
Tssr73179	transcription start site region 73179	819 bp upstream
Tssr73180	transcription start site region 73180	729 bp upstream
Tssr73181	transcription start site region 73181	663 bp upstream
Tssr73182	transcription start site region 73182	651 bp upstream
Tssr73183	transcription start site region 73183	612 bp upstream
Tssr73184	transcription start site region 73184	37 bp downstream
Tssr73185	transcription start site region 73185	1286 bp downstream