rs231301680 SNP Detail

Summary

• ID
  rs231301680
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:133980145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGACATAAT TTTATCCAAA
  GCAAAAATAA ATTGAAACCA TAGCACAGAT TACAAGAAAT TCATCACCAG AACAAGGAAT
  ATACAGAGGA TGTATGGTCA GTAAATATTT CATAGGTGAG AAAATATGCA GAAATTTCAT
  AGTAATTAAA CTATCTGAAT TAAAAAGCAT TTATGTGTAT ACAATAGACA CTGACCCATT
  G
  TTATTATTGT TAATTTATTC TTTTCAAATT AAATACCATT GAACACAGGC TTACATGCTT
  AACTCTTCTA CACTGTAATT AAAATGTGAA TATAGTCTTT GTTGGTGATT AGGAGTAGAT
  TGTTGTAGGG AACAAAATAA AACAAGGAGT CTGGAATTCA TAATAAATAA GGAAGAGGAG
  CTAAATTAAG TAACAAGTGA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320512721	CHEV_2_133963961	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231301680					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:133980145 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12318	CpG island 12318	402 bp distal