rs231329389 SNP Detail

Summary

• ID
  rs231329389
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:81104867 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGCCTCCCC GGAGCCCGAG GGGGCTCAGG
  CCTGAGCAAG TCCCTCGCCC GGTGACCCTG ACCATTTCAC TCTCCCGCGG GCCTCAGTTT
  CCCTACAGAT TTACAAGACC CTGGGATGCC CCGCTGCGCC GGTGACGTGC GCCCCCCCCC
  M
  AAAAAAACGT ATAACCACGC CTCTCCTTTG CTAGTGACCT CTCGGGTGGA AGCCCCGGTG
  GCACCGAACC CAGCCCCTCC ACCCATCCCC ACCTGCAGCA GACACGCCCT CACTTCAGAC
  CGACTGCCAC TGCATCTGGA GCGAGCTGGA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322285126	CHEV_7_88600005	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231329389					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:81104867 () rs orientation: forward

Symbol	Name	Function Class
Cpeb1	cytoplasmic polyadenylation element binding protein 1	within coordinates
Cpeb1os1	cytoplasmic polyadenylation element binding protein 1, opposite strand 1	776 bp upstream
Cpgi19352	CpG island 19352	within coordinates
Rr650129	regulatory region 650129	455 bp distal
Rr650130	regulatory region 650130	1303 bp distal
Rr650131	regulatory region 650131	1199 bp distal
Rr650132	regulatory region 650132	within coordinates
Tssr73332	transcription start site region 73332	355 bp upstream
Tssr73333	transcription start site region 73333	267 bp downstream
Tssr73334	transcription start site region 73334	322 bp downstream
Tssr73335	transcription start site region 73335	370 bp downstream