rs231336930 SNP Detail

Summary

• ID
  rs231336930
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:110685090 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTAACTTGC TGGGCCTCTC
  CGAGCCTCAG GGGTAGTTAA AGGCATCTCT GTGGCAGAAC GGTATGTAAA GTAGCTGATG
  AAGATTCCCG CTCAGGTGGC AGAGAGGCCT TTCAGCAGAG TTCTTCATAA TCTTATAATC
  CTTCCTCCCG GTGACACAGC TTCAGCTGCG GATCCGTGAT CCCCGCCCCC CCCCCCCCCC
  S
  AGGCTGGGAT GTTTCTTCTC TTAGTCATGG GCAGCCTGCC TGCGAGGAGT TCACCCTGAC
  AAACCAGAGT TTCCTCCTTG CTGGCAAGGC CAGGACCTGG GCTGAGCTGA GAACCTGGGA
  GGCCAGGCTG GCTGGTAACT AACACTACTG TAAGTTTTAA ATGCTCAGTA CGTTGATTTT
  GTTTCGTTGG GTTTTGTTTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	JF1/MsJ	KK/HlJ	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZW/LacJ	PL/J	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SEA/GnJ	SJL/J	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss376006700	MGP_WTSI_8_112482358	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	JF1/MsJ	KK/HlJ	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZW/LacJ	PL/J	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SEA/GnJ	SJL/J	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs231336930					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss376006700	MGP_WTSI_8_112482358	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:110685090 () rs orientation: forward

Symbol	Name	Function Class
Marveld3	MARVEL (membrane-associating) domain containing 3	within coordinates
Rr173817	regulatory region 173817	490 bp distal
Rr401124	regulatory region 401124	1045 bp downstream
Rr401125	regulatory region 401125	268 bp downstream