rs231348826 SNP Detail

Summary

• ID
  rs231348826
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:149509075 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGTACTT GATAGTCATG
  ATCATCTTGT CCAATCAACA TATCATGTTA AAATCCAACA AGAACTTGGA TATTTCCAGG
  TAATGTGTAC AAATATAAAT TCAACTTCAG TTAAGTCCCA ATCCAAATTG GAGTAATCAA
  TTTGGGGGGT TAACATTCTA ATAGGTTGTA GTATTTTGCT GTATATTTAA TTTGCAATTA
  T
  CCACTGATGA TGCTGTGTGT TTCTACTGGG CTTATTTAAA ATCTGTATAT CATACAGGTG
  CTATAGCCAT TCAGATCTTT TTTTTTTTCA TAAAAAGACA GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTAAGA GAGAGAGAGA CAGACAGACA GACAGAAATG AAGACAGAGA
  GACAGAGACA CAGAGACAGA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320560198	CHEV_2_149492891	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231348826					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:149509075 () rs orientation: forward

Symbol	Name	Function Class
Gm53264	predicted gene, 53264	within coordinates
Rr566994	regulatory region 566994	417 bp distal