rs231358137 SNP Detail

Summary

• ID
  rs231358137
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78430572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCCCAAA AACAAAAACA
  CTGCAAGCTG GCAAAGGCTG TCCGACCAGC TCTAGCTACT ACCCCGAACT CCTGGCCTTC
  TAAGGTTCAG GGACCACTAG CCCCTTGCTA TAGATGTGGT CAGCAAGGTC ATTGGGTGAG
  GTTTTGCCCT ACGCCCCACA AGCCAAGGGG ACCGTGTCCT AAGTGCCGTC AGGAGGGACA
  Y
  TGGGCTGTCG ATAGCCCTCG TGTTGCACAG AACAGAGGGA CATCCGGTCC AGGTACTCCT
  CCAGCTGACC GCCTAGGCTT GGCTATGGGT GACCTAAGGG GCCGGAGCTC CTTCGACCCA
  GCCACGCCCA TCACTAGCAG GGAGCCCAGG TAGCTATTAT GGTGTTTGGG CGCCCCATCT
  CCTTCCTCTT GGACACCAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323016434	CHEV_9_78371097	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231358137					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78430572 () rs orientation: forward

Symbol	Name	Function Class
Gm47430	predicted gene, 47430	1133 bp downstream
Gm69163	predicted gene, 69163	1729 bp upstream
Rr206776	regulatory region 206776	1171 bp distal
Rr383643	regulatory region 383643	1153 bp upstream