rs231367175 SNP Detail

Summary

• ID
  rs231367175
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:82292525 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCACACAAG TACTAGGGAT
  CCAATCTCCT GTCTTCACGC TTGCACAGTA GGCAGTAACA GCCCTGCATT TGATTTAACT
  GATAATCCAA AGGTGAAACC TAAAAGTCAG ACGGGATGGC TGTCGTCTCT CTCCTGAATA
  CCAGGGGGAC ATGGGTATGC CACAGGGTGG GGCGGGGGAG GGCAGACTGG GGGGGGGGGG
  K
  GGGGACTGTG GAGACATGAA ACAATCCAAG TCCAGAGTAT ATGGGAAAAT CCCTTTAATG
  GGCTAATAAT CATACAGCAA AACGGGAATC TGGTCCTATT GCTGCTTTAT TAAACAAAAA
  TCTAAAAGGG AAGGTCTCTG AAACTGAGTT TATGTCAAAT ATCCCCCTCC CCCAGAAATT
  CTTAACAACT TTGAAAAACA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	BALB/cByJ	C57BL/6J	MA/MyJ	NON/ShiLtJ	RIIIS/J	SPRET/EiJ
ss362188037	MGP_WTSI_4_82020192	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	BALB/cByJ	C57BL/6J	MA/MyJ	NON/ShiLtJ	RIIIS/J	SPRET/EiJ
rs231367175					SNP	T	T	T	T	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss362188037	MGP_WTSI_4_82020192	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:82292525 () rs orientation: forward

Symbol	Name	Function Class
Nfib	nuclear factor I/B	within coordinates
Tssr1213	transcription start site region 1213	339 bp upstream
Tssr42237	transcription start site region 42237	139 bp upstream