rs231377168 SNP Detail

Summary

• ID
  rs231377168
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:37298797 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGCAAGAA GCTGAGGGAG ATAGAGGCCA
  TGATCGCAGT CCAAGAGGAA AAGATCTTCA GACTCAGAAG AATCATAAAA TGATGAGGAG
  TCTCTAAGCC AAGATGCTAC ACAAGGCACT CCATAGACAC ACGCACAAGC ACTATAgcat
  T
  catagatctt gcacctggag agccaatcaa ccagatattt ggaaaaaacg ttctgagctg
  aacatttaga ggttttattt ctcctggtca tttatcccta cacaacacaa tacggcttcg
  gagcatttat gctacatgta ttgggcacta                                 
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319691077	CHEV_1_37316561	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231377168					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:37298797 () rs orientation: forward

Symbol	Name	Function Class
Cnga3	cyclic nucleotide gated channel alpha 3	within coordinates
Cpgi160	CpG island 160	1562 bp proximal
Gm69908	predicted gene, 69908	641 bp downstream
Rr409496	regulatory region 409496	1062 bp distal