rs231411045 SNP Detail

Summary

• ID
  rs231411045
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:76791930 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGGAACGC CAGGGCCAAA
  GGGGGGGAGT GGGTGGGTAG GGGAGTGGGG GTGGGTGGGT AAGGGGGACT TTTGGTATAG
  CATTGGAAAT GTAAATGAGC TAAATACCTA ATAAAAAATG GAAAAAAAAA TTATTATATT
  TCAAAGGCTC CTATGTAGAT ATACTACCTC TATCTGCTAG AGACTAGACA GTCAATCGCA
  Y
  ACACACACAC ACACATACAT GGAAGACAGG ACAACACAAT ATGACAATAT GTATACAAAA
  TCCTAAGGAC GTTTTGAGTA TTTCAAGGAA TTTACCTAGG CCAGGCAGAC AGTCAATTAG
  CACCTGGGAA ATGAGGATTT TGGAGCAGGC TGCCTCCATC GATTATTTCT ATTATTTTGT
  CAATCATTTA GTCCTGGTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320356629	CHEV_2_76799643	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231411045					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:76791930 () rs orientation: forward

Symbol	Name	Function Class
Tssr24818	transcription start site region 24818	114 bp downstream
Ttn	titin	within coordinates