rs231443167 SNP Detail

Summary

• ID
  rs231443167
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:59953647 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTTCCTTGA ACTAGCCAGG GGAGATGGGT
  GTGACCTTCT CTCAGGCTAG AACTCTGGGT ACCCACTCTT CTACCATCTG CTCTGGCTCC
  TGCTCCAGAG CACGAGAGAA AGCCCCCCAA GCCCCGTTAG GTGGGGATGA ATCATAGCAG
  M
  ACTATAGGGC ATCCTCTTTC CCAACAAGAC CCAGGTACCC AGGTCTGATT ATTTCTCACA
  GCCGCTAATA AGGCCACTTG GGTGCCATAA ATAGACATAC TGCAGGAAGG ATGTATTTCC
  CAGTCAACCA CAGTCCCCTT CATCAGCTTG                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323323896	CHEV_10_59580573	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231443167					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:59953647 () rs orientation: forward

Symbol	Name	Function Class
Gm51801	predicted gene, 51801	within coordinates
Rr219869	regulatory region 219869	354 bp proximal
Rr219870	regulatory region 219870	1354 bp proximal
Spock2	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	within coordinates