rs231494026 SNP Detail

Summary

• ID
  rs231494026
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:68734943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCTCTCT AGCCTCTATT
  TTATTGAATC AGAAAATTCT CATTTAGCGT TTGAGATCTT TATTTCAGGA TGGGGGAAAA
  ATCATCTATA GATTCAAAAG GCTTAACAGC TCCCATTAAG AAAGCAGAGA CTGTGAGAGA
  AAGTGCTCCC ACCCACAGAC ATCTGTATAA GGAAAGATCC CCTCAAAAGG CAACACAACC
  R
  CAAGCCTGCA GTGATCTGCA GTAAAGACAG TGAACACCAA GCACACCCTG ATCTGTGTTT
  CCCGAGGGCT CAGAGACCTC TCATGTGCAC AAGGAGGTGG AGTGAACTTT ATAAAATTCC
  TGTCACCTTC TTGGCTACTT ATACCTCTAG AAAGGTAGAT AGACCTAGGA ACCCAGAGCT
  TGTAGGAGCT TCTACACCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss391428992	MGP_WTSI_14_69115551	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	A	A	A	A	A	A	A	G	G	A	A	A	A	A	A	A	A	A	G	A	G	G	A	A	G	G	A	A	G	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs231494026					SNP	G	G	G	A	A	A	A	A	A	A	G	G	A	A	A	A	A	A	A	A	A	G	A	G	G	A	A	G	G	A	A	G	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss391428992	MGP_WTSI_14_69115551	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:68734943 () rs orientation: forward

Symbol	Name	Function Class
Adam7	a disintegrin and metallopeptidase domain 7	mRNA-UTR
Gm31227	predicted gene, 31227	635 bp downstream
Tssr129424	transcription start site region 129424	524 bp downstream