rs231623661 SNP Detail

Summary

• ID
  rs231623661
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:121746067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAAT ATATATGTGT GTGTGTGTAT
  R
  TATATATATA TATATACTTA TATAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C58/J	CZECHII/EiJ	DBA/1J	FVB/NJ	KK/HlJ	LP/J	MA/MyJ	NOD/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	ZALENDE/EiJ
ss642426827	FVB_NJ_9_121826119	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	G	G	A	G	A	A	A	A	G	G	A	G	G	A	A	G	A	A	A	G	A	A	A	G	A	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C58/J	CZECHII/EiJ	DBA/1J	FVB/NJ	KK/HlJ	LP/J	MA/MyJ	NOD/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	ZALENDE/EiJ
rs231623661					SNP	A	A	G	G	A	G	A	A	A	A	G	G	A	G	G	A	A	G	A	A	A	G	A	A	A	G	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss642426827	FVB_NJ_9_121826119	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121746067 () rs orientation: forward

Symbol	Name	Function Class
Cyp8b1	cytochrome P450, family 8, subfamily b, polypeptide 1	696 bp upstream
Rr384022	regulatory region 384022	1617 bp upstream
Tssr92083	transcription start site region 92083	1817 bp upstream
Tssr92084	transcription start site region 92084	686 bp upstream