rs231635584 SNP Detail

Summary

• ID
  rs231635584
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:105438742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAAAGAAAT TTAATACAGT
  ATGATAACTA TTCCTGGTGG TATGACCTCA CAACTGCATG TGTTGGATGA CTCTAAATAT
  ACTTTTTAAT GATTGCTTTA AAAAGCCATA ATGTCGTACT TGGGAGTGGC ATCTAGGATG
  CTCAAAATGT TCTGTTTCTT GGCTCAAGTG ATGTTCCATG AACATTTCAC TTTATGACAA
  Y
  ACATCGAGCT TACCACTTGA ATTTTGCCCT TTCTGCATAA TGTTATACTT GAGTAGAAAG
  TTAACAGTTT AAAGCATGAT TTTATAATGC AGTATGTCAA GTCATTCTAT GAATCTACTC
  TTGTAGGATG CATGCCAAAA ACCAACTGCC TAAGTGTGAT GCAAATAGGA CTTATGACTT
  GGATAAAGTT TCCAATGACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322370582	CHEV_7_112938049	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231635584					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:105438742 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19545	CpG island 19545	1463 bp distal
Dchs1	dachsous cadherin related 1	1881 bp upstream
Rr652815	regulatory region 652815	1892 bp distal
Rr652816	regulatory region 652816	1391 bp distal
Tssr74107	transcription start site region 74107	1980 bp upstream
Tssr74108	transcription start site region 74108	1896 bp upstream