rs231635985 SNP Detail

Summary

• ID
  rs231635985
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103980256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTCTTAGA ACCTTTTCCT CAAGGGCTAG
  ATAGAAACCT CCAAACTCCC CTTTGGAGAG GTTTTCCCAG GCTGCCAAAC AAAAGCACCT
  TAGAGAAGGT TAGAAGAGGG TTTCAATAGA CTGAGGCCTC AGAGGCTCAC CTCACATTTG
  M
  ATACCATTGT CCCATTTTCT CATGCAAAGC TGACCTTGCT GTCCACCTGC CAAGAAGTTA
  TTTTAGATCC AAGTCTTTTC TTTTCCCTCA ATGATTGTTC AAGCAAAAAA TCTCATTAGC
  GTGTGCCTTC ATCTTTATTT CCCCCAGGGT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323163292	CHEV_9_104005387	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231635985					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103980256 () rs orientation: forward

Symbol	Name	Function Class
Acad11	acyl-Coenzyme A dehydrogenase family, member 11	within coordinates
Ackr4	atypical chemokine receptor 4	within coordinates
Gm46999	predicted gene, 46999	1379 bp upstream
Gm47000	predicted gene, 47000	1444 bp downstream
Tssr2998	transcription start site region 2998	446 bp upstream
Tssr91231	transcription start site region 91231	717 bp upstream
Tssr91232	transcription start site region 91232	694 bp upstream
Tssr91233	transcription start site region 91233	610 bp upstream
Tssr91234	transcription start site region 91234	489 bp upstream
Tssr91235	transcription start site region 91235	41 bp upstream