rs231658207 SNP Detail

Summary

• ID
  rs231658207
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:80699616 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGC TGTGACCTTT CCCTCACTGA
  Y
  AGGCACAGAG CTCCAAAGGT CTGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323762495	CHEV_11_80622292	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231658207					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:80699616 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3390	CpG island 3390	1213 bp proximal
Rr236899	regulatory region 236899	within coordinates
Rr247320	regulatory region 247320	984 bp proximal
Tmem98	transmembrane protein 98	1576 bp upstream
Tssr103551	transcription start site region 103551	1567 bp upstream