GGTGG GGGTGGCTAC GTATGTCATG R CGCACATGTG TCAATCAAAG GACGA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss320068363 | CHEV_1_154656230 | CHEVERUD | SCREENING_POP | f | SNP | A | G |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
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rs231701696 | SNP | A | G |
Location: Chr1:152684851 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Ncf2 | neutrophil cytosolic factor 2 | within coordinates | ||||||
Rr420547 | regulatory region 420547 | 1200 bp distal | ||||||
Rr420548 | regulatory region 420548 | 584 bp proximal | ||||||
Rr420549 | regulatory region 420549 | 917 bp proximal | ||||||
Tssr9423 | transcription start site region 9423 | 1310 bp downstream | ||||||
Tssr9424 | transcription start site region 9424 | 1274 bp downstream | ||||||
Tssr9425 | transcription start site region 9425 | 1224 bp downstream | ||||||
Tssr9426 | transcription start site region 9426 | 1202 bp downstream | ||||||
Tssr9427 | transcription start site region 9427 | 1184 bp downstream | ||||||
Tssr9428 | transcription start site region 9428 | 1166 bp downstream | ||||||
Tssr9429 | transcription start site region 9429 | 1141 bp downstream | ||||||
Tssr9430 | transcription start site region 9430 | 1007 bp upstream | ||||||
Tssr14234 | transcription start site region 14234 | 787 bp upstream | ||||||
Tssr14235 | transcription start site region 14235 | 824 bp downstream | ||||||
Tssr14236 | transcription start site region 14236 | 1509 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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