rs231711909 SNP Detail

Summary

• ID
  rs231711909
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:55121090 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACTTGTTT GTACCAGTGT
  GAGCAGGTCT GAAATACTGA ACTGAGGGGC TGGCATGGAA GGCCCCATGA GGGGTGCAGC
  CCCCTCTGAC AAGAATCTTC TTACTGTGAC CTCTGCTCTA AAAGATCAGT GAGCTTTGTG
  AAAATGAACT CAAGCTGATA AGAGTTGGAG CAACAGGTGA GCTGTGAGGT GGGGGGAGGG
  S
  CTGGGGGGGG GGGGAGGGCG TCCGGTGACC TTGGACTGGG ATGCCTGGGA ACACAGAAGC
  AAGCACTGAC TCACAGGATC CCATTCTTTT TTTTCTTTGC AGAATGTTCG AATCTTACCA
  CAGACAGTTC TCTACATGGC AGATTCTGAA ACTTTCATCA GCCTGGAAGA GTGTCGTGGC
  CATAAAAGAG GTAGCTATGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322967300	CHEV_9_55061613	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231711909					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:55121090 () rs orientation: forward

Symbol	Name	Function Class
Fbxo22	F-box protein 22	within coordinates
Rr383398	regulatory region 383398	1397 bp upstream
Rr679266	regulatory region 679266	1376 bp proximal
Tssr85210	transcription start site region 85210	47 bp upstream
Tssr85211	transcription start site region 85211	94 bp upstream