rs231714614 SNP Detail

Summary

• ID
  rs231714614
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115477032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGCTACAC TTCTTTCCCC
  ATTAGCCTCT GCTGTCTTTA TAATTTCATT ACTAGCTAAA GGGAATTTCA CTGCATTTAA
  AGAGGAGGTA AGTGTACATG CTGAGCTGTA GGAGGCTGTC TCAAAAAAAA ACGTTAAAAA
  CTTAAAGTAA TACTTTAAAG TATGAATACG TTTGTGTGCA TGTCTGTATA ATGTACATGT
  R
  CATTCAGATA TGGTGGTGCA CTGTTACAAT CTCAGCAATT GAGAGGCCGA AGGAGGGAGA
  TCATGAGTTG CAGACCAGCT TAGGCAACAT GGGAAGAACC TGTCTCAAAG AAAGGGATGT
  GACTCAGTTG ATATTCTACT TGCCTGACCT GTTTTATGCC TTGAGTCCAG TTCCGAATAG
  TTTATAAACC AGCAAGGTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320892815	CHEV_3_115386301	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231714614					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115477032 () rs orientation: forward

Symbol	Name	Function Class
Gm64341	predicted gene, 64341	1260 bp downstream
Rr397954	regulatory region 397954	1915 bp downstream
Rr583574	regulatory region 583574	1852 bp distal
Rr583575	regulatory region 583575	within coordinates
Tssr31331	transcription start site region 31331	213 bp downstream
Tssr35267	transcription start site region 35267	690 bp upstream