rs231757430 SNP Detail

Summary

• ID
  rs231757430
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75293350 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tcctacatc ctgagctacc tctctagcTG
  ACAGTTTCTA TCTCACCACG CCTTGCATCA CAAAACTCAT TTTTAAATAT atgtacttca
  catggcactt gcctaatatg ctcagaccct ggattaaatc ctcggtatca cctaaaatag
  R
  catggggtct catggctgta accctaacac ttgtggggca gagacagagg gatcaggtca
  aggccgggcc aggccagctg agcctacttg aggccctgtc tgatgaacaa aaCGAACAAG
  AATACTCAGC CCAGATCCCC ACAAAGCGTG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323008196	CHEV_9_75233875	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231757430					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75293350 () rs orientation: forward

Symbol	Name	Function Class
Gm67678	predicted gene, 67678	278 bp downstream
Mapk6	mitogen-activated protein kinase 6	714 bp downstream
Rr683127	regulatory region 683127	1047 bp distal
Tssr90534	transcription start site region 90534	1158 bp downstream
Tssr90535	transcription start site region 90535	1400 bp downstream
Tssr90536	transcription start site region 90536	1819 bp downstream
Tssr90537	transcription start site region 90537	1891 bp downstream
Tssr90538	transcription start site region 90538	1922 bp downstream