rs231768976 SNP Detail

Summary

• ID
  rs231768976
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142209042 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAG TGAGCCCATG CCCAGCCCCT
  Y
  CCCCAACTGG GAAATCAAGA GAAGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322471549	CHEV_7_149841210	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231768976					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142209042 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19966	CpG island 19966	855 bp distal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Mir483	microRNA 483	309 bp upstream
Rr167001	regulatory region 167001	within coordinates
Tssr2463	transcription start site region 2463	1452 bp upstream
Tssr70231	transcription start site region 70231	1740 bp downstream
Tssr70232	transcription start site region 70232	1687 bp downstream
Tssr70233	transcription start site region 70233	1644 bp downstream
Tssr70234	transcription start site region 70234	1606 bp downstream
Tssr70235	transcription start site region 70235	1583 bp downstream
Tssr70236	transcription start site region 70236	1561 bp downstream
Tssr70237	transcription start site region 70237	1460 bp downstream
Tssr70238	transcription start site region 70238	1430 bp downstream
Tssr70239	transcription start site region 70239	1300 bp downstream
Tssr70240	transcription start site region 70240	952 bp downstream
Tssr75872	transcription start site region 75872	1618 bp upstream
Tssr75873	transcription start site region 75873	1606 bp upstream
Tssr75874	transcription start site region 75874	1396 bp upstream
Tssr75875	transcription start site region 75875	1359 bp upstream
Tssr75876	transcription start site region 75876	1311 bp upstream
Tssr75877	transcription start site region 75877	1252 bp upstream
Tssr75878	transcription start site region 75878	970 bp upstream
Tssr75879	transcription start site region 75879	929 bp upstream
Tssr75880	transcription start site region 75880	898 bp upstream
Tssr75881	transcription start site region 75881	379 bp downstream
Tssr75882	transcription start site region 75882	420 bp downstream
Tssr75883	transcription start site region 75883	731 bp downstream
Tssr75884	transcription start site region 75884	769 bp downstream
Tssr75885	transcription start site region 75885	816 bp downstream
Tssr75886	transcription start site region 75886	874 bp downstream