rs231770041 SNP Detail

Summary

• ID
  rs231770041
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97022142 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATATGTCC TAGGATGATG
  CTGTCCCTAG GTCCCTAGAT CCCTAGGTCC CTGACAGCAA GCTGGTAGAG ATTCCTGGTT
  GCTAACATCT TGGCTCAACT GGAGCCTGGG AGGGCAGTAG GGCCCTTCAG TTCTGATGAG
  TGAGAACAGT GACAGGAGCT GGGGCTGGGC TAATCATGGA CAAGAGGCTT CCTGGAGAAT
  R
  TGGTTGGCAA TCATGGAGTC TGTTTTATTT GCATAATTCC TCACCAGAGA CAGAACTATG
  CAACCAAATT AAACTTTGGC TTCTTTCTTC CTTTTTGATG GGGGTCTTCT CTTGTAGCAT
  AGGCTAGCCC CTAACTCAAA ATCCTTCTGC CTTAGCCTCC TTAATAGCTG GGATTAGGGG
  TATGTGCTAA TAATGTCTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323116059	CHEV_9_97040508	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231770041					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97022142 () rs orientation: forward

Symbol	Name	Function Class
Gm57041	predicted gene, 57041	994 bp upstream
Rr685156	regulatory region 685156	183 bp proximal
Tssr86631	transcription start site region 86631	1024 bp upstream