rs231790896 SNP Detail

Summary

• ID
  rs231790896
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147978870 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCTGGAGC CTCCAGTCTC
  TTGAGGGTTA GGTGCATCAT CTCTGAATGA ACACAGACCT GGAAGTCCTC TAGTGGATAT
  GTGTTGGGGG CCTCATATCA GATAGTGTAT GCTGCATGTT TGGTGGTCCA GTGTTTGAAA
  GATCTTGGGG TCCAGATTAA TTGAGACTGC TGGTCCTCCT ACAGGATCAC CCTTCTCCTC
  R
  GGTTCTTTCA GCCTTCCTAA TTCAACAACA GGGATCAGCT GCTTCTGTCC ATTGGTTGGG
  TGCAAATATC TGCACCTGAC TCTTTCAGCT GCTTGTTGGG TCTTTCGGAG GGCAGTCATG
  ATAGATCCCT TTTTGTGAAC ACCCCATAAA TTCAGTCATA GTGTCAGGCC TTGGGACCTC
  CCCTTGAGCT GGATCCCACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321014850	CHEV_3_147936198	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231790896					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147978870 () rs orientation: forward

Symbol	Name	Function Class
Rr375892	regulatory region 375892	729 bp upstream
Rr587183	regulatory region 587183	768 bp distal
Rr587184	regulatory region 587184	466 bp distal