rs231808847 SNP Detail

Summary

• ID
  rs231808847
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:25780159 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTAACTTA TGGACATCCA
  AATGGACAGA CTGCTATGAA TAGTCTTTTT TTTTCTATGC TTTGGTCCAA GCACAAATTC
  CTTGGGTTTT TAAGATTTAG TTTTGTTGAC ATTTTGATCT TCTGTATCTG GTGCTATGCT
  GAATTTGTAA GAAGTCATCT CTAAACTCAA CAAAGAAAAG TTTAACAAGA CAGTTCTTCT
  Y
  AGAAGGGTTT CCGTGGCTAA TCTCCTAGAT ATACATTGAT TTCTATGGTA GAGAGATGTA
  GGCATTAGGT AACACCAGAA AACTGTGCAG TTTCTAAGAC TGTGATTCCA GAAGTATATT
  TCCAGTGTAT GATTTTATTA ATTTTTTTAT ATTTTGTATT TGAGGGAACG GCACCTCATT
  GAGATCTTGT AATTTATCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324304532	CHEV_13_25688045	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231808847					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:25780159 () rs orientation: forward

Symbol	Name	Function Class
Rr275391	regulatory region 275391	759 bp distal
Rr275392	regulatory region 275392	1042 bp proximal