rs231827796 SNP Detail

Summary

• ID
  rs231827796
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:88871903 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCGTTTAAG AGGCAGATTC
  AGGTGGATCT CTGTGAGTTC AAGGTCAGTC ATGGCTAATA CTGAGACTGT CTAAAAAAGA
  AACAAAATTT AATCTGGCAA TTTTTTAAAA AAGATCTATT TATGAGTATG CCGTAGCTAT
  CTTCTGACAC ACCAGAAGAG GGCACCAGAT CTCATTACAG ATGGTTATGA GCCACCATGT
  R
  GTTGGTGGGA ATTGAACTCA GGACCTCTGG AAGAATAGTC AGTGCTCTTA ACCACTGAGC
  TATTTTGCCA GCCCTAATCT GGCAATTTTT TTTTGATAGT TTATTATGCA GAGGAAGCAG
  AGAAAGAGAA AAATTTAAAG AGTTAAGTAT AGAGATCCAC TGGTCCTTGG AACCTTTTTG
  GGAAGGTTAA AAGTAGATAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321602377	CHEV_5_89153069	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231827796					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:88871903 () rs orientation: forward

Symbol	Name	Function Class
Cpgi16032	CpG island 16032	1975 bp distal
Mob1b	MOB kinase activator 1B	Intron
Rr614171	regulatory region 614171	1384 bp distal
Rr614172	regulatory region 614172	within coordinates
Rr614173	regulatory region 614173	32 bp distal
Rr614174	regulatory region 614174	1910 bp proximal