rs231855114 SNP Detail

Summary

• ID
  rs231855114
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:21574324 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCCAGTTG GTGGCAATGG
  TTGGGGAATC TGGACGGTGT GTTTGTTGGA GGAAGTATGT AGCTGGAGGC TGGCTATGGG
  AGTTTAAAGG ATGGCCCTAC TTCCAGGTCA CTTCCAGCTT CCTGTTCCAG CTGTCGTGCC
  TGCATGCTGC CATGCCTCAC CACCAGGATG GACTCTGACC CCCGGAAGGA GTTAGAAACC
  Y
  AAATACTCTA AGCTGCTTTG GCCATGGGAT TTTACACTCT GGAAACTTGA GATGCAACCA
  TGAGTACGTA TGGCTAATGC CAAGGCAGTT ACCTGCTTGC TCTCCCACGT GGAGCTCATG
  TCCATACATG AGTTGGTGCA TACTTGTGTG CTCAAAGCCC ACACTCGTAC TCTTACGAGA
  GAGATGTCTT ACTTTCCTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325752838	CHEV_19_21671450	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231855114					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:21574324 () rs orientation: forward

Symbol	Name	Function Class
1110059E24Rik	RIKEN cDNA 1110059E24 gene	353 bp downstream
Gm38486	predicted gene, 38486	758 bp upstream
Gm59243	predicted gene, 59243	within coordinates
Rr364167	regulatory region 364167	1078 bp proximal