rs231869809 SNP Detail

Summary

• ID
  rs231869809
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:23708143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGTATAAA GCACCAGATA
  TTCAATCTGC AATTGAAAGA CTAATGGGTG CTGTGGTTAT CAGAGCTATA TTCAGTTCTT
  TCACTGAGAA GAATCCAAGT ACAAACACAT AGAGTTATAG CAAGCATATC TCTCTCTCTC
  TCCCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTATA TATATATATA TATATATATA
  Y
  GTCAAGATTT CCCTTTAGCT AATTGCATGA AGAAACTATT AACCACAGCT TCCTCCAGAT
  TCTTACAGCC TAACACTGCA GAAACTTTTT AACAAAAGAT TAACCTGCCT GCCTTTTTCC
  CTCCAGCTGT ATCCAACAAG TCCATTCATT TCCTGGTTGC TCTTTGTGCA TCTCACCAGC
  GTGCACAACC GGTGACGTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324289687	CHEV_13_23615842	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231869809					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:23708143 () rs orientation: forward

Symbol	Name	Function Class
Gm61424	predicted gene, 61424	1357 bp downstream
Rr271078	regulatory region 271078	458 bp proximal
Rr281117	regulatory region 281117	1742 bp distal
Rr281118	regulatory region 281118	857 bp proximal
Rr281119	regulatory region 281119	1657 bp proximal