rs231877472 SNP Detail

Summary

• ID
  rs231877472
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61901134 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCTCACTC CTCCAGGAGA
  TAGATGCATG TGCCACCCGC AGTCTGTGGT CCCCTTTCAG GGGATGGGCG TGTGGAAATC
  TCCAAGAGCT GGACAGAGTA CTCTATACAG AATGGAGGGG GTCTAAAACT TAGTGGGGCA
  CAGATAGAAC CTGAGAAGGA GAGGCAGGGA GAGTCTTGAG ACGAGGGGAA GTTGCTCCCC
  R
  CAACCCCAGA ACCTTAGAAC CAGGTGGTAA AGTGCGGCCT CGGGTGTGGC TCTCACGTTG
  ATTACACTTG ACGTTAGATT TCCTATGATT CCCACATTTC CAGCTGCTCT GGAAGATCAA
  AAGATGAAAA TGGGGTGGGG CTCACGTTCC TCCAAGGCCC AAGCTGGCCT GCTACCCTGT
  TCTGTGCACT CCAGTTTGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323330697	CHEV_10_61528103	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231877472					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61901134 () rs orientation: forward

Symbol	Name	Function Class
D10Mit149	DNA segment, Chr 10, Massachusetts Institute of Technology 149	1773 bp proximal
Tssr93687	transcription start site region 93687	1260 bp upstream