rs231880565 SNP Detail

Summary

• ID
  rs231880565
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:125233831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    caaacataa gataacaaca aaaaccaaac
  ccaaaccacc accaaaaaac aaaacaaaac aaaacaaaac aaaaacaaac caaccaaaca
  aaccaaacaa acaaacaaCC Tggagaagga ggaggaggag gaagaggagg aggaggagga
  R
  gaagaggagg aggaggaaga ggaggaggag gaggaggagg aggaggagga ggaagaagag
  gaggaggagg aagaggagga ggaggaagag gaggaggagg aagaggagga ggaagaggaa
  gaggaggagg aTTCTTTTAA GTATCCAGGA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322448967	CHEV_7_132778173	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231880565					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:125233831 () rs orientation: forward

Symbol	Name	Function Class
D7Mit101	DNA segment, Chr 7, Massachusetts Institute of Technology 101	1532 bp distal
Il21r	interleukin 21 receptor	1089 bp downstream
Tssr68993	transcription start site region 68993	249 bp downstream
Tssr74607	transcription start site region 74607	1860 bp downstream