rs231888182 SNP Detail

Summary

• ID
  rs231888182
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131709499 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGGTGTGA AAATCAAGCC
  CAAGGTGTCC TCTAGAAGAG CAGCTGATGT AGTTAACCAC TGAACATCTC TATAAACCCC
  AGACTACCTC TGAACCCAAG ACCTGCCTCC CTTTTGTCAT CTAGTGCTGA GATTCTAGGC
  ATGTTATGCC AGGCCAAAAA TTGTTTCTCA GGAAAGTTTT AAAATACCAT AAATAGCCAG
  K
  CAGTGGTGGC GCATGCCTTT GATTCAGCAC TCGGGAGGCA GAGGCAGGTG AATCTCTGAG
  TTAGAGGCCA GCAAGGTCTA CAGAGTGAGT TCCAGGATGG CAAAGAGCTA CACAGAGAAA
  CCCTGTCTCA AAAAACCTAA ATAAATAAAT AAAATACCAT AAATGATGCT GTAAAGAGGT
  ATAAAACAAG TGTGCCATAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321329611	CHEV_4_131538103	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231888182					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131709499 () rs orientation: forward

Symbol	Name	Function Class
Epb41	erythrocyte membrane protein band 4.1	within coordinates
Rr600833	regulatory region 600833	222 bp distal
Rr600834	regulatory region 600834	69 bp distal
Rr600835	regulatory region 600835	576 bp proximal
Tssr43622	transcription start site region 43622	538 bp downstream