rs231914370 SNP Detail

Summary

• ID
  rs231914370
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:108704252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAGGGACAT GCAGAGAATG ATTAAACTAC
  GACAGATCTG ATAAAGAGGG AGAGTAACCT CAGAGCTTGA AACCCAGAAA GCTTGGATTA
  TATTTAATTT GTTAAGCTGG GCTCTGAGTG CAGGGGCATG CACGAGAACA TAGTCTCTCT
  R
  AAGTTGAAAA TAATTAACAC AATTATCAAA AGGGTTAAAT CAAGTTGGGT GTGGTTACTC
  AGAGGATTGG CTGTCTACAC AGTGAGATCC TGCCTCCAGa aagaaagaga gagagagaga
  gagagaagag gaagaagaaa agaagagaaa                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320866901	CHEV_3_108599854	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231914370					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108704252 () rs orientation: forward

Symbol	Name	Function Class
Gm66359	predicted gene, 66359	within coordinates
Rr583317	regulatory region 583317	985 bp distal
Rr583318	regulatory region 583318	288 bp distal
Rr583319	regulatory region 583319	1634 bp proximal
Stxbp3	syntaxin binding protein 3	Intron
Tssr35171	transcription start site region 35171	1115 bp downstream