rs231941178 SNP Detail

Summary

• ID
  rs231941178
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:44378620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCATGAATG TGCTGAGGGC
  TCTGTGGTAT CTCATGCTTA CATGGTGTGT CTGTGAATTC ACATGTGTGT GGGTGCACAG
  GTGCATATGT GTGCATGTAT GTGTGTGCCT GCTCATGGGG GGGGGCTGAG GCTGACACTG
  GGTGTCTTCC GTGATCGCTT TCCACCTTGC TCACCCATTC CAGCTAATCT AGCCAGGCAG
  Y
  TTACCCTTGG GATCTCCTGC CTTTGCCCCT TGGGTGCTGA GGTACATGCC TGCCTAGCCT
  TTGACACACA TCCGGGGGAT CTGAACTCAA GGCTTCACAC TTGCGCAGTA AGTGCTTTAT
  CCATGAAGCC ATCTCTCCAG ACCTCCAACA TGATTCTAGG GAGCTGAGTT GACTCGTTCA
  AGGAATATGA TCAGCATCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321100958	CHEV_4_44391492	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231941178					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:44378620 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14212	CpG island 14212	1935 bp proximal
Gm68903	predicted gene, 68903	within coordinates